ZORA Publication List

Publications

• Mattle-Greminger, Maja P; Bilgin Sonay, Tugce; Nater, Alexander; Pybus, Marc; Desai, Tariq; de Valles, Guillem; Casals, Ferran; Scally, Aylwyn; Bertranpetit, Jaume; Marques-Bonet, Tomas; van Schaik, Carel P; Anisimova, Maria; Krützen, Michael (2018). Genomes reveal marked differences in the adaptive evolution between orangutan species. Genome Biology, 19(1):193.
• Nater, Alexander; Mattle-Greminger, Maja Patricia; Nurcahyo, Anton; Nowak, Matthew G; de Manuel, Marc; Desai, Tariq; Groves, Colin; Pybus, Marc; Sonay, Tugce Bilgin; Roos, Christian; Lameira, Adriano R; Wich, Serge A; Askew, James; Davila-Ross, Marina; Fredriksson, Gabriella M; de Valles, Guillem; Casals, Ferran; Prado-Martinez, Javier; Goossens, Benoit; Verschoor, Ernst J; Warren, Kristin S; Singleton, Ian; Marques, David A; Pamungkas, Joko; Perwitasari-Farajallah, Dyah; Rianti, Puji; Tuuga, Augustine; Gut, Ivo G; Gut, Marta; Orozco-terWengel, Pablo; van Schaik, Carel P; Bertranpetit, Jaume; Anisimova, Maria; Scally, Aylwyn; Marques-Bonet, Tomas; Meijaard, Erik; Krützen, Michael (2017). Morphometric, behavioral, and genomic evidence for a new Orangutan species. Current Biology, 27(22):3487-3498.e10.
• Nam, Kiwoong; Munch, Kasper; Mailund, Thomas; Nater, Alexander; Greminger, Maja Patricia; Krützen, Michael; Marquès-Bonet, Tomàs; Schierup, Mikkel Heide (2017). Evidence that the rate of strong selective sweeps increases with population size in the great apes. Proceedings of the National Academy of Sciences of the United States of America, 114(7):1613-1618.
• Kuhlwilm, Martin; de Manuel, Marc; Nater, Alexander; Greminger, Maja P; Krützen, Michael; Marques-Bonet, Tomas (2016). Evolution and demography of the great apes. Current Opinion in Genetics & Development, 41:124-129.
• Bilgin Sonay, Tugce; Carvalho, Tiago; Robinson, Mark D; Greminger, Maja P; Krützen, Michael; Comas, David; Highnam, Gareth; Mittelman, David; Sharp, Andrew; Marques-Bonet, Tomàs; Wagner, Andreas (2015). Tandem repeat variation in human and great ape populations and its impact on gene expression divergence. Genome Research, 25(11):1591-1599.
• Mattle-Greminger, Maja Patricia. Unraveling the evolutionary history of Orangutans (genus: Pongo)- the impact of environmental processes and the genomic basis of adaptation. 2015, University of Zurich, Faculty of Science.
• Nater, Alexander; Greminger, Maja P; Arora, Natasha; van Schaik, Carel P; Goossens, Benoit; Singleton, Ian; Verschoor, Ernst J; Warren, Kristin S; Krützen, Michael (2015). Reconstructing the demographic history of orang-utans using Approximate Bayesian Computation. Molecular Ecology, 24(2):310-327.
• Greminger, Maja P; Stölting, Kai N; Nater, Alexander; Goossens, Benoit; Arora, Natasha; Bruggmann, Rémy; Patrignani, Andrea; Nussberger, Beatrice; Sharma, Reeta; Kraus, Robert H S; Ambu, Laurentius N; Singleton, Ian; Chikhi, Lounes; van Schaik, Carel P; Krützen, Michael (2014). Generation of SNP datasets for orangutan population genomics using improved reduced-representation sequencing and direct comparisons of SNP calling algorithms. BMC Genomics, 15:16.
• Nater, A; Arora, N; Greminger, M P; van Schaik, C P; Singleton, I; Wich, S A; Fredriksson, G; Perwitasari-Farajallah, D; Pamungkas, J; Krützen, M (2013). Marked population structure and recent migration in the critically endangered Sumatran orangutan (Pongo abelii). Journal of Heredity, 104(1):2-13.
• Rotheray, E L; Lepais, O; Nater, A; Krützen, M; Greminger, M; Goulson, D; Bussière, L F (2012). Genetic variation and population decline of an endangered hoverfly Blera fallax (Diptera: Syrphidae). Conservation Genetics, 13(5):1283-1291.
• Arora, N; Van Noordwijk, M A; Ackermann, C; Willems, E P; Nater, A; Greminger, M; Nietlisbach, P; Dunkel, L P; Utami Atmoko, S S; Pamungkas, J; Perwitasari-Farajallah, D; Van Schaik, C P; Krützen, M (2012). Parentage-based pedigree reconstruction reveals female matrilineal clusters and male-biased dispersal in nongregarious Asian great apes, the Bornean orang-utans (Pongo pygmaeus). Molecular Ecology, 21(13):3352-3362.
• Rotheray, Ellen L; Greminger, Maja P; Nater, Alexander; Krützen, Michael; Goulson, David; Bussière, Luc F (2012). Polymorphic microsatellite loci for the endangered pine hoverfly Blera fallax (Diptera: Syrphidae). Conservation Genetics Resources, 4(1):117-120.
• Greminger, M P; Krützen, M; Schelling, C; Pienkowska-Schelling, A; Wandeler, P (2010). The quest for Y-chromosomal markers – methodological strategies for mammalian non-model organisms. Molecular Ecology Resources, 10(3):409-420.
• Nietlisbach, Pirmin; Nater, Alexander; Greminger, Maja P; Arora, Natasha; Krützen, Michael (2010). A multiplex-system to target 16 male-specific and 15 autosomal genetic markers for orang-utans (genus: Pongo). Conservation Genetics Resources, 2(S1):153-158.
• Greminger, Maja P; Schäfer, Martin A; Nater, Alexander; Blanckenhorn, Wolf U; Krützen, Michael (2009). Development of polymorphic microsatellite markers for the dung fly (Sepsis cynipsea). Molecular Ecology Resources, 9(6):1554-1556.